Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Gm14494-201ENSMUST00000118786 435 ntBASIC11.29□□□□□ -0.6
Hist1h1aP43275 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.29□□□□□ -0.6
Hist1h1aP43275 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.29□□□□□ -0.6
Hist1h1aP43275 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.29□□□□□ -0.6
Hist1h1aP43275 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h1aP43275 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.28□□□□□ -0.6
Hist1h1aP43275 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Gm6222-201ENSMUST00000120787 396 ntBASIC11.28□□□□□ -0.6
Hist1h1aP43275 Gm11745-201ENSMUST00000121669 448 ntBASIC11.28□□□□□ -0.6
Hist1h1aP43275 AA543401-201ENSMUST00000164248 1269 ntBASIC11.28□□□□□ -0.6
Hist1h1aP43275 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.28□□□□□ -0.6
Hist1h1aP43275 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.28□□□□□ -0.6
Hist1h1aP43275 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.28□□□□□ -0.6
Hist1h1aP43275 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.28□□□□□ -0.6
Hist1h1aP43275 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.28□□□□□ -0.6
Hist1h1aP43275 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h1aP43275 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h1aP43275 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h1aP43275 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h1aP43275 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h1aP43275 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.27□□□□□ -0.6
Hist1h1aP43275 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h1aP43275 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h1aP43275 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h1aP43275 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Hist1h1aP43275 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h1aP43275 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h1aP43275 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h1aP43275 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist1h1aP43275 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hist1h1aP43275 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hist1h1aP43275 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist1h1aP43275 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist1h1aP43275 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Hist1h1aP43275 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist1h1aP43275 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist1h1aP43275 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hist1h1aP43275 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.27□□□□□ -0.61
Hist1h1aP43275 Gm11779-201ENSMUST00000118541 368 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms