Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Msh2P43247 Gm28630-201ENSMUST00000187806 498 ntBASIC14.11□□□□□ -0.15
Msh2P43247 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.11□□□□□ -0.15
Msh2P43247 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.11□□□□□ -0.15
Msh2P43247 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.11□□□□□ -0.15
Msh2P43247 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.11□□□□□ -0.15
Msh2P43247 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.1□□□□□ -0.15
Msh2P43247 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Msh2P43247 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.1□□□□□ -0.15
Msh2P43247 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Msh2P43247 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Msh2P43247 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.1□□□□□ -0.15
Msh2P43247 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.1□□□□□ -0.15
Msh2P43247 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Msh2P43247 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.1□□□□□ -0.15
Msh2P43247 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.1□□□□□ -0.15
Msh2P43247 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.1□□□□□ -0.15
Msh2P43247 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.1□□□□□ -0.15
Msh2P43247 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.1□□□□□ -0.15
Msh2P43247 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Msh2P43247 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msh2P43247 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Msh2P43247 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Msh2P43247 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Msh2P43247 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Msh2P43247 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Msh2P43247 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Msh2P43247 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.09□□□□□ -0.15
Msh2P43247 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.09□□□□□ -0.15
Msh2P43247 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.09□□□□□ -0.15
Msh2P43247 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Msh2P43247 Gm27622-201ENSMUST00000183779 60 ntBASIC14.09□□□□□ -0.15
Msh2P43247 Gm27631-201ENSMUST00000184163 466 ntBASIC14.09□□□□□ -0.15
Msh2P43247 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.09□□□□□ -0.15
Msh2P43247 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.09□□□□□ -0.15
Msh2P43247 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Msh2P43247 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.09□□□□□ -0.15
Msh2P43247 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msh2P43247 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Msh2P43247 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Msh2P43247 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Msh2P43247 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Msh2P43247 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Msh2P43247 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Msh2P43247 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Msh2P43247 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Msh2P43247 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Msh2P43247 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msh2P43247 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Msh2P43247 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msh2P43247 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Msh2P43247 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.08□□□□□ -0.16
Msh2P43247 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms