Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm17968-201ENSMUST00000194902 784 ntBASIC12.03□□□□□ -0.48
Cd28P31041 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.03□□□□□ -0.48
Cd28P31041 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.03□□□□□ -0.48
Cd28P31041 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cd28P31041 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cd28P31041 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cd28P31041 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cd28P31041 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cd28P31041 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd28P31041 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Cd28P31041 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd28P31041 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd28P31041 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.02□□□□□ -0.48
Cd28P31041 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd28P31041 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd28P31041 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cd28P31041 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cd28P31041 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cd28P31041 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Cd28P31041 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.02□□□□□ -0.49
Cd28P31041 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.02□□□□□ -0.49
Cd28P31041 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.02□□□□□ -0.49
Cd28P31041 Gm28659-201ENSMUST00000188013 759 ntBASIC12.02□□□□□ -0.49
Cd28P31041 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Gm29741-201ENSMUST00000192667 421 ntBASIC12.02□□□□□ -0.49
Cd28P31041 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.02□□□□□ -0.49
Cd28P31041 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.02□□□□□ -0.49
Cd28P31041 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.02□□□□□ -0.49
Cd28P31041 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cd28P31041 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cd28P31041 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cd28P31041 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.02□□□□□ -0.49
Cd28P31041 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd28P31041 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.01□□□□□ -0.49
Cd28P31041 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.01□□□□□ -0.49
Cd28P31041 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cd28P31041 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cd28P31041 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cd28P31041 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.01□□□□□ -0.49
Cd28P31041 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.01□□□□□ -0.49
Cd28P31041 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.01□□□□□ -0.49
Cd28P31041 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Rpph1-201ENSMUST00000175096 319 ntBASIC12.01□□□□□ -0.49
Cd28P31041 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cd28P31041 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Cd28P31041 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cd28P31041 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Cd28P31041 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cd28P31041 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.01□□□□□ -0.49
Cd28P31041 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cd28P31041 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd28P31041 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cd28P31041 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12□□□□□ -0.49
Cd28P31041 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12□□□□□ -0.49
Cd28P31041 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms