Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm29741-201ENSMUST00000192667 421 ntBASIC10.67□□□□□ -0.7
Ccl6P27784 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccl6P27784 Gm9229-201ENSMUST00000222777 126 ntBASIC10.67□□□□□ -0.7
Ccl6P27784 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.67□□□□□ -0.7
Ccl6P27784 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ccl6P27784 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccl6P27784 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccl6P27784 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.67□□□□□ -0.7
Ccl6P27784 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl6P27784 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.66□□□□□ -0.7
Ccl6P27784 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccl6P27784 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Ccl6P27784 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccl6P27784 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.66□□□□□ -0.7
Ccl6P27784 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccl6P27784 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.66□□□□□ -0.7
Ccl6P27784 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccl6P27784 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.66□□□□□ -0.7
Ccl6P27784 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccl6P27784 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Mir497b-201ENSMUST00000093601 125 ntBASIC10.66□□□□□ -0.7
Ccl6P27784 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccl6P27784 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccl6P27784 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Ccl6P27784 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Ccl6P27784 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.66□□□□□ -0.7
Ccl6P27784 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccl6P27784 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccl6P27784 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.66□□□□□ -0.7
Ccl6P27784 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl6P27784 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ccl6P27784 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ccl6P27784 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.65□□□□□ -0.7
Ccl6P27784 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ccl6P27784 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl6P27784 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Ccl6P27784 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms