Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxc9P09633 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hoxc9P09633 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.59■□□□□ 0.41
Hoxc9P09633 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC17.59■□□□□ 0.41
Hoxc9P09633 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.59■□□□□ 0.41
Hoxc9P09633 Gm38341-201ENSMUST00000195357 515 ntBASIC17.59■□□□□ 0.41
Hoxc9P09633 AC122305.4-201ENSMUST00000216159 1206 ntBASIC17.59■□□□□ 0.41
Hoxc9P09633 Gm9368-201ENSMUST00000219348 831 ntBASIC17.59■□□□□ 0.41
Hoxc9P09633 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC17.59■□□□□ 0.41
Hoxc9P09633 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hoxc9P09633 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc9P09633 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc9P09633 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc9P09633 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc9P09633 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc9P09633 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC17.58■□□□□ 0.41
Hoxc9P09633 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc9P09633 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc9P09633 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc9P09633 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc9P09633 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc9P09633 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc9P09633 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc9P09633 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc9P09633 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Hoxc9P09633 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC17.58■□□□□ 0.4
Hoxc9P09633 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hoxc9P09633 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.58■□□□□ 0.4
Hoxc9P09633 Gm4857-201ENSMUST00000192718 785 ntBASIC17.58■□□□□ 0.4
Hoxc9P09633 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.58■□□□□ 0.4
Hoxc9P09633 Gm37259-201ENSMUST00000193903 849 ntBASIC17.58■□□□□ 0.4
Hoxc9P09633 Gm8227-201ENSMUST00000223306 571 ntBASIC17.58■□□□□ 0.4
Hoxc9P09633 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.58■□□□□ 0.4
Hoxc9P09633 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Hoxc9P09633 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc9P09633 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Hoxc9P09633 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hoxc9P09633 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.57■□□□□ 0.4
Hoxc9P09633 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Gm7809-201ENSMUST00000153199 742 ntBASIC17.57■□□□□ 0.4
Hoxc9P09633 Gm7895-201ENSMUST00000187459 1173 ntBASIC17.57■□□□□ 0.4
Hoxc9P09633 Gm44364-201ENSMUST00000198368 141 ntBASIC17.57■□□□□ 0.4
Hoxc9P09633 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC17.57■□□□□ 0.4
Hoxc9P09633 AC022775.2-201ENSMUST00000227885 646 ntBASIC17.57■□□□□ 0.4
Hoxc9P09633 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.57■□□□□ 0.4
Hoxc9P09633 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc9P09633 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms