Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TnfP06804 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.47□□□□□ -0.09
TnfP06804 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TnfP06804 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TnfP06804 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.47□□□□□ -0.09
TnfP06804 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TnfP06804 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TnfP06804 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.47□□□□□ -0.09
TnfP06804 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.47□□□□□ -0.09
TnfP06804 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TnfP06804 Gm7561-201ENSMUST00000211203 886 ntBASIC14.47□□□□□ -0.09
TnfP06804 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.47□□□□□ -0.09
TnfP06804 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TnfP06804 Gm10012-201ENSMUST00000078252 192 ntBASIC14.47□□□□□ -0.09
TnfP06804 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
TnfP06804 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TnfP06804 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TnfP06804 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TnfP06804 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.47□□□□□ -0.09
TnfP06804 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TnfP06804 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TnfP06804 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TnfP06804 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TnfP06804 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.47□□□□□ -0.09
TnfP06804 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TnfP06804 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TnfP06804 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TnfP06804 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.46□□□□□ -0.09
TnfP06804 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TnfP06804 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
TnfP06804 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Gm6152-201ENSMUST00000151704 340 ntBASIC14.46□□□□□ -0.09
TnfP06804 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.46□□□□□ -0.09
TnfP06804 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.46□□□□□ -0.09
TnfP06804 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Itm2b-204ENSMUST00000228637 783 ntBASIC14.46□□□□□ -0.09
TnfP06804 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.46□□□□□ -0.09
TnfP06804 Gm26315-201ENSMUST00000083890 321 ntBASIC14.46□□□□□ -0.09
TnfP06804 Gm6091-201ENSMUST00000098307 165 ntBASIC14.46□□□□□ -0.09
TnfP06804 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TnfP06804 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
TnfP06804 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TnfP06804 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TnfP06804 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TnfP06804 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TnfP06804 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TnfP06804 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TnfP06804 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TnfP06804 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
TnfP06804 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TnfP06804 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.45□□□□□ -0.1
TnfP06804 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.45□□□□□ -0.1
TnfP06804 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.45□□□□□ -0.1
TnfP06804 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.45□□□□□ -0.1
TnfP06804 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TnfP06804 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.45□□□□□ -0.1
TnfP06804 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.45□□□□□ -0.1
TnfP06804 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.45□□□□□ -0.1
TnfP06804 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.45□□□□□ -0.1
TnfP06804 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.45□□□□□ -0.1
TnfP06804 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.45□□□□□ -0.1
TnfP06804 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.45□□□□□ -0.1
TnfP06804 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.45□□□□□ -0.1
TnfP06804 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.45□□□□□ -0.1
TnfP06804 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.45□□□□□ -0.1
TnfP06804 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TnfP06804 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TnfP06804 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TnfP06804 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms