Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P01852 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P01852 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
P01852 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.53□□□□□ -0.4
P01852 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.53□□□□□ -0.4
P01852 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P01852 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
P01852 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.53□□□□□ -0.4
P01852 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P01852 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.53□□□□□ -0.4
P01852 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P01852 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P01852 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P01852 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P01852 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P01852 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
P01852 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
P01852 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
P01852 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P01852 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
P01852 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
P01852 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Gm15240-201ENSMUST00000118156 720 ntBASIC12.52□□□□□ -0.41
P01852 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.52□□□□□ -0.41
P01852 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.52□□□□□ -0.41
P01852 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
P01852 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
P01852 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
P01852 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.52□□□□□ -0.41
P01852 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P01852 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Mir497b-201ENSMUST00000093601 125 ntBASIC12.52□□□□□ -0.41
P01852 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.52□□□□□ -0.41
P01852 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P01852 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P01852 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P01852 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.51□□□□□ -0.41
P01852 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.51□□□□□ -0.41
P01852 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.51□□□□□ -0.41
P01852 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
P01852 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
P01852 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Mir698-201ENSMUST00000102164 109 ntBASIC12.51□□□□□ -0.41
P01852 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
P01852 Gm12859-201ENSMUST00000117834 427 ntBASIC12.51□□□□□ -0.41
P01852 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
P01852 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.51□□□□□ -0.41
P01852 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P01852 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
P01852 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.5□□□□□ -0.41
P01852 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.5□□□□□ -0.41
P01852 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.5□□□□□ -0.41
P01852 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.5□□□□□ -0.41
P01852 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.5□□□□□ -0.41
P01852 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.5□□□□□ -0.41
P01852 Gm19220-201ENSMUST00000222682 803 ntBASIC12.5□□□□□ -0.41
P01852 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms