Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col5a1O88207 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
Col5a1O88207 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.15□□□□□ -0.46
Col5a1O88207 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Gm11637-201ENSMUST00000120601 592 ntBASIC12.15□□□□□ -0.46
Col5a1O88207 Gm11964-201ENSMUST00000120982 444 ntBASIC12.15□□□□□ -0.46
Col5a1O88207 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Gm16379-201ENSMUST00000161469 348 ntBASIC12.15□□□□□ -0.46
Col5a1O88207 Gm28693-202ENSMUST00000190758 331 ntBASIC12.15□□□□□ -0.46
Col5a1O88207 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Gm8762-201ENSMUST00000193486 339 ntBASIC12.15□□□□□ -0.46
Col5a1O88207 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.15□□□□□ -0.46
Col5a1O88207 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col5a1O88207 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col5a1O88207 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.47
Col5a1O88207 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Col5a1O88207 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Col5a1O88207 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col5a1O88207 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.15□□□□□ -0.47
Col5a1O88207 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.15□□□□□ -0.47
Col5a1O88207 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col5a1O88207 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col5a1O88207 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Gm4909-201ENSMUST00000118749 794 ntBASIC12.14□□□□□ -0.47
Col5a1O88207 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.14□□□□□ -0.47
Col5a1O88207 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.14□□□□□ -0.47
Col5a1O88207 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.14□□□□□ -0.47
Col5a1O88207 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.14□□□□□ -0.47
Col5a1O88207 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col5a1O88207 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col5a1O88207 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Col5a1O88207 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.14□□□□□ -0.47
Col5a1O88207 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.14□□□□□ -0.47
Col5a1O88207 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.14□□□□□ -0.47
Col5a1O88207 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.14□□□□□ -0.47
Col5a1O88207 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.14□□□□□ -0.47
Col5a1O88207 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.14□□□□□ -0.47
Col5a1O88207 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.14□□□□□ -0.47
Col5a1O88207 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col5a1O88207 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col5a1O88207 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.13□□□□□ -0.47
Col5a1O88207 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col5a1O88207 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col5a1O88207 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 765 ms