Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc1a4O35874 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc1a4O35874 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc1a4O35874 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc1a4O35874 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc1a4O35874 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc1a4O35874 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc1a4O35874 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc1a4O35874 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Slc1a4O35874 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc1a4O35874 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Slc1a4O35874 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Slc1a4O35874 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Slc1a4O35874 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.04■□□□□ 0.16
Slc1a4O35874 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc1a4O35874 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc1a4O35874 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc1a4O35874 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc1a4O35874 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.04■□□□□ 0.16
Slc1a4O35874 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.03■□□□□ 0.16
Slc1a4O35874 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.03■□□□□ 0.16
Slc1a4O35874 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Slc1a4O35874 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
Slc1a4O35874 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Slc1a4O35874 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.03■□□□□ 0.16
Slc1a4O35874 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Slc1a4O35874 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Gm44719-201ENSMUST00000206404 149 ntBASIC16.03■□□□□ 0.16
Slc1a4O35874 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Slc1a4O35874 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Slc1a4O35874 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Slc1a4O35874 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.03■□□□□ 0.16
Slc1a4O35874 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc1a4O35874 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Slc1a4O35874 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.03■□□□□ 0.16
Slc1a4O35874 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.02■□□□□ 0.16
Slc1a4O35874 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Slc1a4O35874 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc1a4O35874 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc1a4O35874 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc1a4O35874 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc1a4O35874 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Slc1a4O35874 Gm15770-201ENSMUST00000117498 584 ntBASIC16.02■□□□□ 0.16
Slc1a4O35874 Gm11478-201ENSMUST00000117851 599 ntBASIC16.02■□□□□ 0.16
Slc1a4O35874 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.02■□□□□ 0.16
Slc1a4O35874 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.02■□□□□ 0.16
Slc1a4O35874 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.02■□□□□ 0.16
Slc1a4O35874 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Slc1a4O35874 Gm5186-201ENSMUST00000218781 920 ntBASIC16.02■□□□□ 0.16
Slc1a4O35874 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc1a4O35874 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Slc1a4O35874 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Slc1a4O35874 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Slc1a4O35874 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc1a4O35874 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc1a4O35874 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Slc1a4O35874 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc1a4O35874 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Slc1a4O35874 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc1a4O35874 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc1a4O35874 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Slc1a4O35874 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc1a4O35874 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Slc1a4O35874 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc1a4O35874 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
Slc1a4O35874 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc1a4O35874 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Slc1a4O35874 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc1a4O35874 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc1a4O35874 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.01■□□□□ 0.15
Slc1a4O35874 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.01■□□□□ 0.15
Slc1a4O35874 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Slc1a4O35874 Gm5161-201ENSMUST00000075243 853 ntBASIC16.01■□□□□ 0.15
Slc1a4O35874 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc1a4O35874 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc1a4O35874 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Slc1a4O35874 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc1a4O35874 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc1a4O35874 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.01■□□□□ 0.15
Slc1a4O35874 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.01■□□□□ 0.15
Slc1a4O35874 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms