Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5-4A0A075B652 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Gm10253-201ENSMUST00000194270 940 ntBASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Gm18027-201ENSMUST00000218947 619 ntBASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5-4A0A075B652 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Gm7774-201ENSMUST00000200064 533 ntBASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms