Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 AC130669.1-201ENSMUST00000228537 1672 ntBASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Gm28386-201ENSMUST00000189147 1849 ntBASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Gm11185-201ENSMUST00000117732 1007 ntBASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Gm7284-201ENSMUST00000131667 944 ntBASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Gm18489-201ENSMUST00000172565 551 ntBASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav8-1A0A075B641 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav8-1A0A075B641 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav8-1A0A075B641 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav8-1A0A075B641 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav8-1A0A075B641 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Trav8-1A0A075B641 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav8-1A0A075B641 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms