Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Gm9385-201ENSMUST00000117563 472 ntBASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Gm7461-201ENSMUST00000058918 827 ntBASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ap4s1Q9WVL1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Gm5177-201ENSMUST00000183092 997 ntBASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Gm34391-201ENSMUST00000203706 907 ntBASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap4s1Q9WVL1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ap4s1Q9WVL1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ap4s1Q9WVL1 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.08□□□□□ -0.31
Ap4s1Q9WVL1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms