Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Gm24420-201ENSMUST00000176676 59 ntBASIC13□□□□□ -0.33
Lhx9Q9WUH2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Gm18934-201ENSMUST00000216671 1044 ntBASIC13□□□□□ -0.33
Lhx9Q9WUH2 AC153962.4-201ENSMUST00000217878 242 ntBASIC13□□□□□ -0.33
Lhx9Q9WUH2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Matn2-206ENSMUST00000228570 2798 ntBASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Gm43094-201ENSMUST00000196549 921 ntBASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Gm19078-201ENSMUST00000206311 727 ntBASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lhx9Q9WUH2 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Gm11524-201ENSMUST00000119349 807 ntBASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Gm17794-201ENSMUST00000220252 955 ntBASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lhx9Q9WUH2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms