Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Gm11964-201ENSMUST00000120982 444 ntBASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Gm2231-201ENSMUST00000125661 612 ntBASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Gm42997-202ENSMUST00000200321 985 ntBASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Morn2-202ENSMUST00000227729 656 ntBASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Efs-202ENSMUST00000227037 2540 ntBASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-4Q9EQM3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Gm24514-201ENSMUST00000174961 285 ntBASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Mir5120-201ENSMUST00000175020 78 ntBASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Gm2260-201ENSMUST00000184965 657 ntBASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nkx2-4Q9EQM3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.96□□□□□ -0.18
Nkx2-4Q9EQM3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx2-4Q9EQM3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx2-4Q9EQM3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx2-4Q9EQM3 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.96□□□□□ -0.18
Nkx2-4Q9EQM3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx2-4Q9EQM3 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.96□□□□□ -0.18
Nkx2-4Q9EQM3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx2-4Q9EQM3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Nkx2-4Q9EQM3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms