Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Gm21854-201ENSMUST00000179901 471 ntBASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp2aQ9DB34 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.29□□□□□ -0.12
Chmp2aQ9DB34 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Gm5425-201ENSMUST00000214125 459 ntBASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms