Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim42Q9D2H5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Gm27741-201ENSMUST00000185060 237 ntBASIC13.71□□□□□ -0.21
Trim42Q9D2H5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Gm44719-201ENSMUST00000206404 149 ntBASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Gm10060-201ENSMUST00000212002 111 ntBASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Trim42Q9D2H5 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Trim42Q9D2H5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim42Q9D2H5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trim42Q9D2H5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim42Q9D2H5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim42Q9D2H5 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim42Q9D2H5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms