Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssr1Q9CY50 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Gm15957-201ENSMUST00000118893 974 ntBASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssr1Q9CY50 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Gm18049-201ENSMUST00000208909 581 ntBASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ssr1Q9CY50 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssr1Q9CY50 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms