Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Mir698-201ENSMUST00000102164 109 ntBASIC16.11■□□□□ 0.17
Smc3Q9CW03 Gm14822-201ENSMUST00000122247 291 ntBASIC16.11■□□□□ 0.17
Smc3Q9CW03 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Gm5779-201ENSMUST00000218467 910 ntBASIC16.11■□□□□ 0.17
Smc3Q9CW03 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.11■□□□□ 0.17
Smc3Q9CW03 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc3Q9CW03 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.1■□□□□ 0.17
Smc3Q9CW03 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.1■□□□□ 0.17
Smc3Q9CW03 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Mir1897-201ENSMUST00000122581 272 ntBASIC16.1■□□□□ 0.17
Smc3Q9CW03 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Gm24513-201ENSMUST00000174964 138 ntBASIC16.1■□□□□ 0.17
Smc3Q9CW03 Gm27397-201ENSMUST00000184997 107 ntBASIC16.1■□□□□ 0.17
Smc3Q9CW03 Gm10253-201ENSMUST00000194270 940 ntBASIC16.1■□□□□ 0.17
Smc3Q9CW03 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.1■□□□□ 0.17
Smc3Q9CW03 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smc3Q9CW03 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.1■□□□□ 0.17
Smc3Q9CW03 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.1■□□□□ 0.17
Smc3Q9CW03 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc3Q9CW03 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.09■□□□□ 0.17
Smc3Q9CW03 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc3Q9CW03 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Smc3Q9CW03 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Smc3Q9CW03 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Smc3Q9CW03 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Smc3Q9CW03 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smc3Q9CW03 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smc3Q9CW03 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms