Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldnd1Q9CQX5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Gm3890-201ENSMUST00000182416 207 ntBASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Gm27341-201ENSMUST00000183570 106 ntBASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldnd1Q9CQX5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms