Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Thumpd1Q99J36 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Thumpd1Q99J36 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Rubie-203ENSMUST00000227803 2430 ntBASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.2□□□□□ -0.46
Thumpd1Q99J36 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.2□□□□□ -0.46
Thumpd1Q99J36 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Syt7-205ENSMUST00000224135 1557 ntBASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Gm11025-201ENSMUST00000140773 466 ntBASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Mir8117-201ENSMUST00000184773 107 ntBASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Gm18057-201ENSMUST00000208220 503 ntBASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Gm45453-201ENSMUST00000211758 853 ntBASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thumpd1Q99J36 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms