Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col20a1Q923P0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.13■□□□□ 0.17
Col20a1Q923P0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Gm8213-201ENSMUST00000118191 441 ntBASIC16.13■□□□□ 0.17
Col20a1Q923P0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Gm24644-201ENSMUST00000157114 139 ntBASIC16.13■□□□□ 0.17
Col20a1Q923P0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.13■□□□□ 0.17
Col20a1Q923P0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Gm45784-201ENSMUST00000188360 142 ntBASIC16.13■□□□□ 0.17
Col20a1Q923P0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col20a1Q923P0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.12■□□□□ 0.17
Col20a1Q923P0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Proscos-202ENSMUST00000178990 666 ntBASIC16.12■□□□□ 0.17
Col20a1Q923P0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col20a1Q923P0 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.11■□□□□ 0.17
Col20a1Q923P0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Gm10156-201ENSMUST00000122364 462 ntBASIC16.11■□□□□ 0.17
Col20a1Q923P0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.11■□□□□ 0.17
Col20a1Q923P0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.11■□□□□ 0.17
Col20a1Q923P0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col20a1Q923P0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col20a1Q923P0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms