Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Mir1247-201ENSMUST00000116706 82 ntBASIC15.62■□□□□ 0.09
Trex1Q91XB0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.62■□□□□ 0.09
Trex1Q91XB0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.62■□□□□ 0.09
Trex1Q91XB0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.62■□□□□ 0.09
Trex1Q91XB0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trex1Q91XB0 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.62■□□□□ 0.09
Trex1Q91XB0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.61■□□□□ 0.09
Trex1Q91XB0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.61■□□□□ 0.09
Trex1Q91XB0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.61■□□□□ 0.09
Trex1Q91XB0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.61■□□□□ 0.09
Trex1Q91XB0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Gm7399-201ENSMUST00000032395 858 ntBASIC15.61■□□□□ 0.09
Trex1Q91XB0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Olfr582-201ENSMUST00000098212 960 ntBASIC15.61■□□□□ 0.09
Trex1Q91XB0 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.61■□□□□ 0.09
Trex1Q91XB0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trex1Q91XB0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.6■□□□□ 0.09
Trex1Q91XB0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.6■□□□□ 0.09
Trex1Q91XB0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Gm45880-201ENSMUST00000213041 853 ntBASIC15.6■□□□□ 0.09
Trex1Q91XB0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.6■□□□□ 0.09
Trex1Q91XB0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trex1Q91XB0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms