Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Proscos-202ENSMUST00000178990 666 ntBASIC14.56□□□□□ -0.08
TraipQ8VIG6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Gm7430-201ENSMUST00000193824 1144 ntBASIC14.56□□□□□ -0.08
TraipQ8VIG6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.56□□□□□ -0.08
TraipQ8VIG6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Gm44882-201ENSMUST00000205702 802 ntBASIC14.56□□□□□ -0.08
TraipQ8VIG6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.56□□□□□ -0.08
TraipQ8VIG6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.55□□□□□ -0.08
TraipQ8VIG6 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.55□□□□□ -0.08
TraipQ8VIG6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Gm11803-201ENSMUST00000119966 444 ntBASIC14.55□□□□□ -0.08
TraipQ8VIG6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.55□□□□□ -0.08
TraipQ8VIG6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.55□□□□□ -0.08
TraipQ8VIG6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Gm9899-201ENSMUST00000065519 555 ntBASIC14.55□□□□□ -0.08
TraipQ8VIG6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.55□□□□□ -0.08
TraipQ8VIG6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TraipQ8VIG6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.54□□□□□ -0.08
TraipQ8VIG6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms