Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Gm9002-201ENSMUST00000178437 499 ntBASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Gm21854-201ENSMUST00000179901 471 ntBASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdt1Q8R4E9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Gm4984-201ENSMUST00000115987 360 ntBASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Gm15460-201ENSMUST00000118147 391 ntBASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cdt1Q8R4E9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Gm15393-201ENSMUST00000120499 219 ntBASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Gm27892-201ENSMUST00000185017 106 ntBASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cdt1Q8R4E9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms