Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip3Q8CHD8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip3Q8CHD8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Snora78-201ENSMUST00000158630 128 ntBASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip3Q8CHD8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rab11fip3Q8CHD8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rab11fip3Q8CHD8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Gm11803-201ENSMUST00000119966 444 ntBASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Gm22331-201ENSMUST00000158066 136 ntBASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms