Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Mir698-201ENSMUST00000102164 109 ntBASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Gm13015-201ENSMUST00000118674 204 ntBASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28aQ8CEI3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28aQ8CEI3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Gm9824-201ENSMUST00000178707 561 ntBASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms