Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Uba3Q8C878 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.43□□□□□ -0.1
Uba3Q8C878 Gm43094-201ENSMUST00000196549 921 ntBASIC14.43□□□□□ -0.1
Uba3Q8C878 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.43□□□□□ -0.1
Uba3Q8C878 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.43□□□□□ -0.1
Uba3Q8C878 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Uba3Q8C878 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.43□□□□□ -0.1
Uba3Q8C878 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Uba3Q8C878 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Uba3Q8C878 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Uba3Q8C878 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Uba3Q8C878 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Uba3Q8C878 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Uba3Q8C878 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Uba3Q8C878 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.42□□□□□ -0.1
Uba3Q8C878 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Uba3Q8C878 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Uba3Q8C878 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.42□□□□□ -0.1
Uba3Q8C878 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.42□□□□□ -0.1
Uba3Q8C878 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Uba3Q8C878 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.41□□□□□ -0.1
Uba3Q8C878 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.41□□□□□ -0.1
Uba3Q8C878 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Uba3Q8C878 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.41□□□□□ -0.1
Uba3Q8C878 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Uba3Q8C878 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.41□□□□□ -0.1
Uba3Q8C878 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms