Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Gm13226-201ENSMUST00000117838 404 ntBASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Gm29649-201ENSMUST00000185649 419 ntBASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Gm29608-201ENSMUST00000190444 463 ntBASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sh3rf2Q8BZT2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Gm6152-201ENSMUST00000151704 340 ntBASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Gm24196-201ENSMUST00000179161 110 ntBASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh3rf2Q8BZT2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sh3rf2Q8BZT2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sh3rf2Q8BZT2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sh3rf2Q8BZT2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Sh3rf2Q8BZT2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Gm45784-201ENSMUST00000188360 142 ntBASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms