Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 BC001981-202ENSMUST00000191393 1545 ntBASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trerf1Q8BXJ2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Mir125a-201ENSMUST00000083545 68 ntBASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trerf1Q8BXJ2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Gm14767-201ENSMUST00000121559 586 ntBASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 AA619741-201ENSMUST00000195095 646 ntBASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Gm16476-201ENSMUST00000221544 139 ntBASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trerf1Q8BXJ2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms