Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Gm20445-201ENSMUST00000061905 565 ntBASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Depdc1bQ8BH88 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Matn2-206ENSMUST00000228570 2798 ntBASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Depdc1bQ8BH88 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Depdc1bQ8BH88 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Depdc1bQ8BH88 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Depdc1bQ8BH88 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Depdc1bQ8BH88 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms