Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim36Q80WG7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.24□□□□□ -0.29
Trim36Q80WG7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.23□□□□□ -0.29
Trim36Q80WG7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.23□□□□□ -0.29
Trim36Q80WG7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Gm8410-201ENSMUST00000117225 605 ntBASIC13.23□□□□□ -0.29
Trim36Q80WG7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim36Q80WG7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Gm27306-201ENSMUST00000183970 107 ntBASIC13.23□□□□□ -0.29
Trim36Q80WG7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.23□□□□□ -0.29
Trim36Q80WG7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.23□□□□□ -0.29
Trim36Q80WG7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.23□□□□□ -0.29
Trim36Q80WG7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim36Q80WG7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim36Q80WG7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim36Q80WG7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Gm28630-201ENSMUST00000187806 498 ntBASIC13.22□□□□□ -0.29
Trim36Q80WG7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Gm6888-201ENSMUST00000221983 706 ntBASIC13.22□□□□□ -0.29
Trim36Q80WG7 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.22□□□□□ -0.29
Trim36Q80WG7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim36Q80WG7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms