Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Gm18062-201ENSMUST00000208020 547 ntBASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Gm18055-201ENSMUST00000208254 547 ntBASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Gm27839-201ENSMUST00000184242 106 ntBASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubfd1Q78JW9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Gm38671-201ENSMUST00000200573 130 ntBASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Gm18473-201ENSMUST00000220543 868 ntBASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubfd1Q78JW9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms