Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Gm17376-201ENSMUST00000166016 84 ntBASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Gm21769-201ENSMUST00000211922 111 ntBASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Gm30285-201ENSMUST00000214614 422 ntBASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Gm15897-201ENSMUST00000117770 1486 ntBASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd4Q6PDQ2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Gm18584-201ENSMUST00000203098 964 ntBASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Gm18056-201ENSMUST00000207670 568 ntBASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Gm18061-201ENSMUST00000208350 562 ntBASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Gm18063-201ENSMUST00000208529 568 ntBASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Gm18052-201ENSMUST00000208750 559 ntBASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 n-R5s77-201ENSMUST00000083757 119 ntBASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chd4Q6PDQ2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Gm29199-201ENSMUST00000187766 775 ntBASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Chd4Q6PDQ2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd4Q6PDQ2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd4Q6PDQ2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd4Q6PDQ2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd4Q6PDQ2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chd4Q6PDQ2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd4Q6PDQ2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Mir7070-201ENSMUST00000183657 86 ntBASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Gm8738-201ENSMUST00000172606 329 ntBASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd4Q6PDQ2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd4Q6PDQ2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms