Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Gm11594-201ENSMUST00000122313 162 ntBASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd3Q6P9Z1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Gm25287-201ENSMUST00000103846 110 ntBASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Gm22918-201ENSMUST00000103855 110 ntBASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Gm13365-201ENSMUST00000121188 973 ntBASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Gm2756-201ENSMUST00000195851 400 ntBASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd3Q6P9Z1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms