Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Gm27618-201ENSMUST00000183671 60 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 Gm28630-201ENSMUST00000187806 498 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 Gm37751-201ENSMUST00000192440 1198 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 AA619741-201ENSMUST00000195095 646 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.22□□□□□ -0.77
Foxc1Q61572 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 CT009711.2-202ENSMUST00000224538 973 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.22□□□□□ -0.77
Foxc1Q61572 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Foxc1Q61572 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Foxc1Q61572 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Foxc1Q61572 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Foxc1Q61572 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Foxc1Q61572 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Foxc1Q61572 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Foxc1Q61572 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Foxc1Q61572 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.21□□□□□ -0.77
Foxc1Q61572 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Foxc1Q61572 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Foxc1Q61572 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Foxc1Q61572 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Foxc1Q61572 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Foxc1Q61572 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Foxc1Q61572 Gm24543-201ENSMUST00000103867 82 ntBASIC10.21□□□□□ -0.77
Foxc1Q61572 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Foxc1Q61572 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.21□□□□□ -0.77
Foxc1Q61572 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.21□□□□□ -0.77
Foxc1Q61572 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Foxc1Q61572 Gm5745-201ENSMUST00000183748 313 ntBASIC10.21□□□□□ -0.77
Foxc1Q61572 Gm27989-201ENSMUST00000184721 107 ntBASIC10.21□□□□□ -0.77
Foxc1Q61572 Gm37857-201ENSMUST00000191784 1199 ntBASIC10.21□□□□□ -0.77
Foxc1Q61572 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Foxc1Q61572 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.21□□□□□ -0.77
Foxc1Q61572 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.21□□□□□ -0.77
Foxc1Q61572 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Foxc1Q61572 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC10.21□□□□□ -0.78
Foxc1Q61572 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.21□□□□□ -0.78
Foxc1Q61572 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.78
Foxc1Q61572 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC10.21□□□□□ -0.78
Foxc1Q61572 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Foxc1Q61572 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Foxc1Q61572 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm13223-201ENSMUST00000118609 747 ntBASIC10.2□□□□□ -0.78
Foxc1Q61572 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm14767-201ENSMUST00000121559 586 ntBASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms