Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.07■□□□□ 0
Ecm1Q61508 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ecm1Q61508 Gm6222-202ENSMUST00000182143 629 ntBASIC15.07■□□□□ 0
Ecm1Q61508 Gm4857-201ENSMUST00000192718 785 ntBASIC15.07■□□□□ 0
Ecm1Q61508 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.07■□□□□ 0
Ecm1Q61508 Gm38341-201ENSMUST00000195357 515 ntBASIC15.07■□□□□ 0
Ecm1Q61508 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.07■□□□□ 0
Ecm1Q61508 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.07■□□□□ 0
Ecm1Q61508 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.07■□□□□ 0
Ecm1Q61508 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.07■□□□□ 0
Ecm1Q61508 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.07■□□□□ 0
Ecm1Q61508 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.07■□□□□ 0
Ecm1Q61508 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.07■□□□□ 0
Ecm1Q61508 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ecm1Q61508 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ecm1Q61508 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.06■□□□□ 0
Ecm1Q61508 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.06■□□□□ 0
Ecm1Q61508 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ecm1Q61508 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.06■□□□□ 0
Ecm1Q61508 Gm12241-201ENSMUST00000118330 726 ntBASIC15.06■□□□□ 0
Ecm1Q61508 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ecm1Q61508 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.06■□□□□ 0
Ecm1Q61508 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.06■□□□□ 0
Ecm1Q61508 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ecm1Q61508 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ecm1Q61508 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ecm1Q61508 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ecm1Q61508 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.05■□□□□ 0
Ecm1Q61508 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ecm1Q61508 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ecm1Q61508 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.05■□□□□ 0
Ecm1Q61508 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ecm1Q61508 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ecm1Q61508 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Gm15236-201ENSMUST00000117309 379 ntBASIC15.05■□□□□ -0
Ecm1Q61508 Gm16202-201ENSMUST00000117532 544 ntBASIC15.05■□□□□ -0
Ecm1Q61508 Gm8805-201ENSMUST00000117848 313 ntBASIC15.05■□□□□ -0
Ecm1Q61508 Gm6447-201ENSMUST00000118905 835 ntBASIC15.05■□□□□ -0
Ecm1Q61508 Gm12134-201ENSMUST00000122109 520 ntBASIC15.05■□□□□ -0
Ecm1Q61508 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.05■□□□□ -0
Ecm1Q61508 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.05■□□□□ -0
Ecm1Q61508 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.05■□□□□ -0
Ecm1Q61508 Gm45865-201ENSMUST00000211815 945 ntBASIC15.05■□□□□ -0
Ecm1Q61508 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.05■□□□□ -0
Ecm1Q61508 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ecm1Q61508 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ecm1Q61508 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.05■□□□□ -0
Ecm1Q61508 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ecm1Q61508 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ecm1Q61508 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ecm1Q61508 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.04■□□□□ -0
Ecm1Q61508 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ecm1Q61508 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ecm1Q61508 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.04■□□□□ -0
Ecm1Q61508 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.04■□□□□ -0
Ecm1Q61508 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.04■□□□□ -0
Ecm1Q61508 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ecm1Q61508 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ecm1Q61508 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ecm1Q61508 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ecm1Q61508 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms