Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Satb1Q60611 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Satb1Q60611 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Satb1Q60611 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.22□□□□□ -0.13
Satb1Q60611 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Satb1Q60611 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Satb1Q60611 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Satb1Q60611 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.21□□□□□ -0.13
Satb1Q60611 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Satb1Q60611 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Satb1Q60611 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Satb1Q60611 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.21□□□□□ -0.13
Satb1Q60611 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Satb1Q60611 Gm13464-201ENSMUST00000119418 935 ntBASIC14.21□□□□□ -0.13
Satb1Q60611 Gm12176-201ENSMUST00000121420 875 ntBASIC14.21□□□□□ -0.13
Satb1Q60611 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Mir8109-201ENSMUST00000184375 117 ntBASIC14.21□□□□□ -0.13
Satb1Q60611 Gm7783-201ENSMUST00000204795 781 ntBASIC14.21□□□□□ -0.13
Satb1Q60611 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.21□□□□□ -0.13
Satb1Q60611 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Satb1Q60611 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Satb1Q60611 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.21□□□□□ -0.13
Satb1Q60611 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.21□□□□□ -0.13
Satb1Q60611 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Satb1Q60611 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Satb1Q60611 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Satb1Q60611 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.21□□□□□ -0.14
Satb1Q60611 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.21□□□□□ -0.14
Satb1Q60611 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Satb1Q60611 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Satb1Q60611 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Satb1Q60611 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Satb1Q60611 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Satb1Q60611 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Satb1Q60611 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Satb1Q60611 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.21□□□□□ -0.14
Satb1Q60611 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.2□□□□□ -0.14
Satb1Q60611 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Satb1Q60611 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Satb1Q60611 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.2□□□□□ -0.14
Satb1Q60611 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Satb1Q60611 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Satb1Q60611 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.2□□□□□ -0.14
Satb1Q60611 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Satb1Q60611 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.2□□□□□ -0.14
Satb1Q60611 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.2□□□□□ -0.14
Satb1Q60611 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Satb1Q60611 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Satb1Q60611 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Satb1Q60611 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Satb1Q60611 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Satb1Q60611 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Satb1Q60611 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Satb1Q60611 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Satb1Q60611 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Satb1Q60611 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Satb1Q60611 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Satb1Q60611 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Satb1Q60611 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Satb1Q60611 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Satb1Q60611 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms