Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Grk6-205ENSMUST00000224653 2976 ntBASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Gm15393-201ENSMUST00000120499 219 ntBASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Gm14767-201ENSMUST00000121559 586 ntBASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav5d-4Q5R1F6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Mir698-201ENSMUST00000102164 109 ntBASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav5d-4Q5R1F6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5d-4Q5R1F6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5d-4Q5R1F6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav5d-4Q5R1F6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5d-4Q5R1F6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.77□□□□□ -0.52
Trav5d-4Q5R1F6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav5d-4Q5R1F6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav5d-4Q5R1F6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms