Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm6198-201ENSMUST00000191337 2929 ntBASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm25063-201ENSMUST00000104666 94 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm22121-201ENSMUST00000175148 54 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm43997-201ENSMUST00000203986 1005 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 AC121357.1-201ENSMUST00000227365 608 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm22144-201ENSMUST00000157402 102 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm26875-201ENSMUST00000181006 950 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm38092-201ENSMUST00000195600 653 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm5641-201ENSMUST00000091130 1488 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm9109-201ENSMUST00000120254 1405 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm16166-201ENSMUST00000118291 787 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm6447-201ENSMUST00000118905 835 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm11246-201ENSMUST00000120880 345 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm24248-201ENSMUST00000157321 322 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gm9361-201ENSMUST00000198695 1507 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 CT009713.10-201ENSMUST00000225013 1986 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 CT025553.1-201ENSMUST00000226292 299 ntBASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ush2AQ2QI47 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm13736-201ENSMUST00000119272 253 ntBASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm18038-201ENSMUST00000197900 485 ntBASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm45594-201ENSMUST00000211717 241 ntBASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm19009-201ENSMUST00000223072 823 ntBASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms