Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smarcc1P97496 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smarcc1P97496 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smarcc1P97496 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Smarcc1P97496 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Smarcc1P97496 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smarcc1P97496 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC17.06■□□□□ 0.32
Smarcc1P97496 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smarcc1P97496 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Gm15370-201ENSMUST00000117158 253 ntBASIC17.06■□□□□ 0.32
Smarcc1P97496 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC17.06■□□□□ 0.32
Smarcc1P97496 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarcc1P97496 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Mir3547-201ENSMUST00000175461 88 ntBASIC17.06■□□□□ 0.32
Smarcc1P97496 Gm6222-202ENSMUST00000182143 629 ntBASIC17.06■□□□□ 0.32
Smarcc1P97496 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarcc1P97496 Gm8227-201ENSMUST00000223306 571 ntBASIC17.06■□□□□ 0.32
Smarcc1P97496 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Mir433-201ENSMUST00000093564 124 ntBASIC17.06■□□□□ 0.32
Smarcc1P97496 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc1P97496 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.05■□□□□ 0.32
Smarcc1P97496 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Gm22323-201ENSMUST00000103832 109 ntBASIC17.05■□□□□ 0.32
Smarcc1P97496 Gm11658-201ENSMUST00000120913 1008 ntBASIC17.05■□□□□ 0.32
Smarcc1P97496 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC17.05■□□□□ 0.32
Smarcc1P97496 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Mir5132-201ENSMUST00000175166 71 ntBASIC17.05■□□□□ 0.32
Smarcc1P97496 Gm2467-201ENSMUST00000182266 1010 ntBASIC17.05■□□□□ 0.32
Smarcc1P97496 Gm6981-201ENSMUST00000182467 1008 ntBASIC17.05■□□□□ 0.32
Smarcc1P97496 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.05■□□□□ 0.32
Smarcc1P97496 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smarcc1P97496 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Mettl6-204ENSMUST00000227595 1027 ntBASIC17.05■□□□□ 0.32
Smarcc1P97496 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.05■□□□□ 0.32
Smarcc1P97496 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc1P97496 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smarcc1P97496 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.04■□□□□ 0.32
Smarcc1P97496 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Smarcc1P97496 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.04■□□□□ 0.32
Smarcc1P97496 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.04■□□□□ 0.32
Smarcc1P97496 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Smarcc1P97496 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms