Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.41□□□□□ -0.74
Vamp3P63024 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.41□□□□□ -0.74
Vamp3P63024 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Vamp3P63024 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Vamp3P63024 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.4□□□□□ -0.74
Vamp3P63024 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.4□□□□□ -0.74
Vamp3P63024 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
Vamp3P63024 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Timm23-208ENSMUST00000226683 750 ntBASIC10.4□□□□□ -0.74
Vamp3P63024 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Vamp3P63024 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Vamp3P63024 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.4□□□□□ -0.74
Vamp3P63024 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.4□□□□□ -0.74
Vamp3P63024 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Vamp3P63024 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.4□□□□□ -0.74
Vamp3P63024 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Vamp3P63024 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Vamp3P63024 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Vamp3P63024 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.4□□□□□ -0.75
Vamp3P63024 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Vamp3P63024 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Vamp3P63024 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Vamp3P63024 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Vamp3P63024 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Syt7-205ENSMUST00000224135 1557 ntBASIC10.39□□□□□ -0.75
Vamp3P63024 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.39□□□□□ -0.75
Vamp3P63024 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Spsb2-203ENSMUST00000112473 1322 ntBASIC10.39□□□□□ -0.75
Vamp3P63024 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Vamp3P63024 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Vamp3P63024 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Vamp3P63024 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Vamp3P63024 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.39□□□□□ -0.75
Vamp3P63024 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC10.39□□□□□ -0.75
Vamp3P63024 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Gm7213-201ENSMUST00000215977 950 ntBASIC10.39□□□□□ -0.75
Vamp3P63024 Gm7370-201ENSMUST00000219471 767 ntBASIC10.39□□□□□ -0.75
Vamp3P63024 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Vamp3P63024 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.39□□□□□ -0.75
Vamp3P63024 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Vamp3P63024 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms