Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.63□□□□□ -0.71
Pfn1P62962 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.63□□□□□ -0.71
Pfn1P62962 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.63□□□□□ -0.71
Pfn1P62962 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.63□□□□□ -0.71
Pfn1P62962 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.63□□□□□ -0.71
Pfn1P62962 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.63□□□□□ -0.71
Pfn1P62962 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Pfn1P62962 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Pfn1P62962 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pfn1P62962 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Pfn1P62962 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.62□□□□□ -0.71
Pfn1P62962 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.62□□□□□ -0.71
Pfn1P62962 Gm16026-204ENSMUST00000162652 683 ntBASIC10.62□□□□□ -0.71
Pfn1P62962 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.62□□□□□ -0.71
Pfn1P62962 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.62□□□□□ -0.71
Pfn1P62962 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.62□□□□□ -0.71
Pfn1P62962 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pfn1P62962 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pfn1P62962 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfn1P62962 Matn2-203ENSMUST00000226766 3252 ntBASIC10.62□□□□□ -0.71
Pfn1P62962 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pfn1P62962 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pfn1P62962 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.61□□□□□ -0.71
Pfn1P62962 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.61□□□□□ -0.71
Pfn1P62962 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.61□□□□□ -0.71
Pfn1P62962 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.61□□□□□ -0.71
Pfn1P62962 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pfn1P62962 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.61□□□□□ -0.71
Pfn1P62962 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Gm7153-201ENSMUST00000117092 455 ntBASIC10.61□□□□□ -0.71
Pfn1P62962 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Gm7862-201ENSMUST00000121461 292 ntBASIC10.61□□□□□ -0.71
Pfn1P62962 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Pfn1P62962 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC10.61□□□□□ -0.71
Pfn1P62962 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pfn1P62962 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pfn1P62962 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pfn1P62962 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pfn1P62962 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pfn1P62962 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfn1P62962 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms