Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SmoP56726 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SmoP56726 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SmoP56726 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.74□□□□□ -0.21
SmoP56726 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Gm12928-201ENSMUST00000117115 573 ntBASIC13.74□□□□□ -0.21
SmoP56726 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.74□□□□□ -0.21
SmoP56726 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.74□□□□□ -0.21
SmoP56726 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.74□□□□□ -0.21
SmoP56726 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.74□□□□□ -0.21
SmoP56726 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.74□□□□□ -0.21
SmoP56726 Gm5035-201ENSMUST00000215581 927 ntBASIC13.74□□□□□ -0.21
SmoP56726 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.74□□□□□ -0.21
SmoP56726 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SmoP56726 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
SmoP56726 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SmoP56726 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SmoP56726 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.74□□□□□ -0.21
SmoP56726 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SmoP56726 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SmoP56726 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.73□□□□□ -0.21
SmoP56726 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SmoP56726 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Gm27892-201ENSMUST00000185017 106 ntBASIC13.73□□□□□ -0.21
SmoP56726 Gm44397-201ENSMUST00000195950 113 ntBASIC13.73□□□□□ -0.21
SmoP56726 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.73□□□□□ -0.21
SmoP56726 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.73□□□□□ -0.21
SmoP56726 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.73□□□□□ -0.21
SmoP56726 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SmoP56726 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
SmoP56726 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SmoP56726 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SmoP56726 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
SmoP56726 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SmoP56726 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.72□□□□□ -0.21
SmoP56726 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SmoP56726 Gm6244-201ENSMUST00000178732 841 ntBASIC13.72□□□□□ -0.21
SmoP56726 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SmoP56726 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms