Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Sox1P53783 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Gm15276-201ENSMUST00000145953 498 ntBASIC13.92□□□□□ -0.18
Sox1P53783 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Sox1P53783 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.92□□□□□ -0.18
Sox1P53783 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Sox1P53783 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox1P53783 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sox1P53783 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.92□□□□□ -0.18
Sox1P53783 AA914427-201ENSMUST00000193194 1166 ntBASIC13.92□□□□□ -0.18
Sox1P53783 Gm45219-201ENSMUST00000205602 465 ntBASIC13.92□□□□□ -0.18
Sox1P53783 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sox1P53783 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.92□□□□□ -0.18
Sox1P53783 Gm26315-201ENSMUST00000083890 321 ntBASIC13.92□□□□□ -0.18
Sox1P53783 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Sox1P53783 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sox1P53783 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox1P53783 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sox1P53783 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.91□□□□□ -0.18
Sox1P53783 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.91□□□□□ -0.18
Sox1P53783 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.91□□□□□ -0.18
Sox1P53783 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sox1P53783 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sox1P53783 Gm13316-201ENSMUST00000140537 691 ntBASIC13.91□□□□□ -0.18
Sox1P53783 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.91□□□□□ -0.18
Sox1P53783 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.91□□□□□ -0.18
Sox1P53783 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sox1P53783 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sox1P53783 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.91□□□□□ -0.18
Sox1P53783 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sox1P53783 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.91□□□□□ -0.18
Sox1P53783 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox1P53783 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.9□□□□□ -0.18
Sox1P53783 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sox1P53783 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sox1P53783 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Gm23270-201ENSMUST00000104055 131 ntBASIC13.9□□□□□ -0.18
Sox1P53783 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Sox1P53783 Gm11675-201ENSMUST00000121873 832 ntBASIC13.9□□□□□ -0.18
Sox1P53783 Gm11434-201ENSMUST00000122379 629 ntBASIC13.9□□□□□ -0.18
Sox1P53783 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.9□□□□□ -0.18
Sox1P53783 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
Sox1P53783 Gm44262-201ENSMUST00000204969 372 ntBASIC13.9□□□□□ -0.18
Sox1P53783 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox1P53783 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.9□□□□□ -0.18
Sox1P53783 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sox1P53783 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox1P53783 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sox1P53783 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox1P53783 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms