Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
GdnfP48540 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
GdnfP48540 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
GdnfP48540 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.03□□□□□ -0.48
GdnfP48540 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.03□□□□□ -0.48
GdnfP48540 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.03□□□□□ -0.48
GdnfP48540 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GdnfP48540 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GdnfP48540 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.02□□□□□ -0.48
GdnfP48540 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
GdnfP48540 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GdnfP48540 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GdnfP48540 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GdnfP48540 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
GdnfP48540 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
GdnfP48540 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
GdnfP48540 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
GdnfP48540 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.02□□□□□ -0.49
GdnfP48540 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.02□□□□□ -0.49
GdnfP48540 Mir6990-201ENSMUST00000183724 91 ntBASIC12.02□□□□□ -0.49
GdnfP48540 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.02□□□□□ -0.49
GdnfP48540 Gm2756-201ENSMUST00000195851 400 ntBASIC12.02□□□□□ -0.49
GdnfP48540 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.02□□□□□ -0.49
GdnfP48540 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.02□□□□□ -0.49
GdnfP48540 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
GdnfP48540 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.02□□□□□ -0.49
GdnfP48540 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
GdnfP48540 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
GdnfP48540 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
GdnfP48540 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
GdnfP48540 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
GdnfP48540 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
GdnfP48540 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
GdnfP48540 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.01□□□□□ -0.49
GdnfP48540 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Gm6736-201ENSMUST00000166583 948 ntBASIC12.01□□□□□ -0.49
GdnfP48540 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.01□□□□□ -0.49
GdnfP48540 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.01□□□□□ -0.49
GdnfP48540 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.01□□□□□ -0.49
GdnfP48540 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.01□□□□□ -0.49
GdnfP48540 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.01□□□□□ -0.49
GdnfP48540 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.01□□□□□ -0.49
GdnfP48540 Gm9182-201ENSMUST00000217829 639 ntBASIC12.01□□□□□ -0.49
GdnfP48540 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.01□□□□□ -0.49
GdnfP48540 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
GdnfP48540 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.01□□□□□ -0.49
GdnfP48540 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
GdnfP48540 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
GdnfP48540 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
GdnfP48540 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GdnfP48540 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
GdnfP48540 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GdnfP48540 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
GdnfP48540 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
GdnfP48540 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms