Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.14□□□□□ -0.15
Msh2P43247 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.14□□□□□ -0.15
Msh2P43247 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.14□□□□□ -0.15
Msh2P43247 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.13□□□□□ -0.15
Msh2P43247 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Msh2P43247 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.13□□□□□ -0.15
Msh2P43247 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.13□□□□□ -0.15
Msh2P43247 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Msh2P43247 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.13□□□□□ -0.15
Msh2P43247 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.13□□□□□ -0.15
Msh2P43247 Gm8410-201ENSMUST00000117225 605 ntBASIC14.13□□□□□ -0.15
Msh2P43247 Gm6222-201ENSMUST00000120787 396 ntBASIC14.13□□□□□ -0.15
Msh2P43247 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.13□□□□□ -0.15
Msh2P43247 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Msh2P43247 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Msh2P43247 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Msh2P43247 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Msh2P43247 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.12□□□□□ -0.15
Msh2P43247 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Gm5566-201ENSMUST00000116118 459 ntBASIC14.12□□□□□ -0.15
Msh2P43247 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.12□□□□□ -0.15
Msh2P43247 Gm9719-201ENSMUST00000162765 543 ntBASIC14.12□□□□□ -0.15
Msh2P43247 Mir6956-201ENSMUST00000183598 62 ntBASIC14.12□□□□□ -0.15
Msh2P43247 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Msh2P43247 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Msh2P43247 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Msh2P43247 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Msh2P43247 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.11□□□□□ -0.15
Msh2P43247 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Msh2P43247 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.11□□□□□ -0.15
Msh2P43247 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.11□□□□□ -0.15
Msh2P43247 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Msh2P43247 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Msh2P43247 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Msh2P43247 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.11□□□□□ -0.15
Msh2P43247 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms