Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx1-2P42580 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Nkx1-2P42580 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Nkx1-2P42580 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.86■□□□□ 0.29
Nkx1-2P42580 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.86■□□□□ 0.29
Nkx1-2P42580 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx1-2P42580 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.85■□□□□ 0.29
Nkx1-2P42580 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Nkx1-2P42580 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Syt7-205ENSMUST00000224135 1557 ntBASIC16.85■□□□□ 0.29
Nkx1-2P42580 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-2P42580 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.84■□□□□ 0.29
Nkx1-2P42580 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm23935-201ENSMUST00000102303 57 ntBASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm24270-201ENSMUST00000102326 57 ntBASIC16.84■□□□□ 0.29
Nkx1-2P42580 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm24245-201ENSMUST00000157318 57 ntBASIC16.84■□□□□ 0.29
Nkx1-2P42580 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm27533-201ENSMUST00000183800 152 ntBASIC16.84■□□□□ 0.29
Nkx1-2P42580 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm8396-201ENSMUST00000057361 823 ntBASIC16.84■□□□□ 0.29
Nkx1-2P42580 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Mir497b-201ENSMUST00000093601 125 ntBASIC16.84■□□□□ 0.29
Nkx1-2P42580 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-2P42580 Mypopos-202ENSMUST00000205975 2321 ntBASIC16.84■□□□□ 0.29
Nkx1-2P42580 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Nkx1-2P42580 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Nkx1-2P42580 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Nkx1-2P42580 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.83■□□□□ 0.28
Nkx1-2P42580 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Gm27622-201ENSMUST00000183779 60 ntBASIC16.83■□□□□ 0.28
Nkx1-2P42580 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.83■□□□□ 0.28
Nkx1-2P42580 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.83■□□□□ 0.28
Nkx1-2P42580 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.83■□□□□ 0.28
Nkx1-2P42580 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-2P42580 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-2P42580 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms