Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Rom1P32958 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.83□□□□□ -0.68
Rom1P32958 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.83□□□□□ -0.68
Rom1P32958 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Gm15483-201ENSMUST00000120338 456 ntBASIC10.83□□□□□ -0.68
Rom1P32958 Gm7862-201ENSMUST00000121461 292 ntBASIC10.83□□□□□ -0.68
Rom1P32958 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Rom1P32958 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.83□□□□□ -0.68
Rom1P32958 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Gm18737-201ENSMUST00000173594 937 ntBASIC10.83□□□□□ -0.68
Rom1P32958 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.83□□□□□ -0.68
Rom1P32958 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rom1P32958 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.83□□□□□ -0.68
Rom1P32958 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.83□□□□□ -0.68
Rom1P32958 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Rom1P32958 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.82□□□□□ -0.68
Rom1P32958 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rom1P32958 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.82□□□□□ -0.68
Rom1P32958 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Rom1P32958 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Rom1P32958 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.82□□□□□ -0.68
Rom1P32958 Gm5177-201ENSMUST00000183092 997 ntBASIC10.82□□□□□ -0.68
Rom1P32958 Gm27459-201ENSMUST00000184860 107 ntBASIC10.82□□□□□ -0.68
Rom1P32958 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC10.82□□□□□ -0.68
Rom1P32958 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.82□□□□□ -0.68
Rom1P32958 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.82□□□□□ -0.68
Rom1P32958 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC10.82□□□□□ -0.68
Rom1P32958 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rom1P32958 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rom1P32958 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Rom1P32958 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rom1P32958 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rom1P32958 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rom1P32958 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Rom1P32958 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms