Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.73□□□□□ -0.37
Hoxc5P32043 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Gm2445-201ENSMUST00000182798 989 ntBASIC12.73□□□□□ -0.37
Hoxc5P32043 Gm28630-201ENSMUST00000187806 498 ntBASIC12.73□□□□□ -0.37
Hoxc5P32043 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc5P32043 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc5P32043 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc5P32043 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxc5P32043 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hoxc5P32043 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxc5P32043 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hoxc5P32043 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc5P32043 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc5P32043 Gm29741-201ENSMUST00000192667 421 ntBASIC12.72□□□□□ -0.37
Hoxc5P32043 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc5P32043 Shd-206ENSMUST00000225145 998 ntBASIC12.72□□□□□ -0.37
Hoxc5P32043 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hoxc5P32043 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.72□□□□□ -0.37
Hoxc5P32043 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hoxc5P32043 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc5P32043 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc5P32043 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc5P32043 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hoxc5P32043 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.71□□□□□ -0.37
Hoxc5P32043 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc5P32043 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc5P32043 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc5P32043 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.71□□□□□ -0.37
Hoxc5P32043 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.71□□□□□ -0.37
Hoxc5P32043 Gm38294-201ENSMUST00000192831 381 ntBASIC12.71□□□□□ -0.37
Hoxc5P32043 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms