Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nedd8P29595 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.62□□□□□ -0.39
Nedd8P29595 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Nedd8P29595 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nedd8P29595 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nedd8P29595 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Nedd8P29595 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.62□□□□□ -0.39
Nedd8P29595 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.62□□□□□ -0.39
Nedd8P29595 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.62□□□□□ -0.39
Nedd8P29595 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.62□□□□□ -0.39
Nedd8P29595 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nedd8P29595 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Nedd8P29595 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.62□□□□□ -0.39
Nedd8P29595 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Nedd8P29595 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.62□□□□□ -0.39
Nedd8P29595 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.61□□□□□ -0.39
Nedd8P29595 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.61□□□□□ -0.39
Nedd8P29595 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.61□□□□□ -0.39
Nedd8P29595 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Nedd8P29595 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nedd8P29595 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nedd8P29595 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nedd8P29595 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.61□□□□□ -0.39
Nedd8P29595 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nedd8P29595 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nedd8P29595 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Nedd8P29595 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.6□□□□□ -0.39
Nedd8P29595 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.6□□□□□ -0.39
Nedd8P29595 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.6□□□□□ -0.39
Nedd8P29595 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.6□□□□□ -0.39
Nedd8P29595 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.6□□□□□ -0.39
Nedd8P29595 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.6□□□□□ -0.39
Nedd8P29595 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms